Miyakogusa Predicted Gene
- Lj5g3v2179680.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1NFQ4_SOYBN |
778 |
88.0 |
93.1 |
(tr|I1NFQ4) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT2G01170.1 |
651 |
75.0 |
85.9 |
| Symbols: BAT1 | bidirectional amino acid transporter 1 | chr2:102364-104462 REVERSE LENGTH=516 |
| Medicago |
Medtr1g109380.1 |
724 |
88.0 |
92.8 |
| amino-acid permease BAT1-like protein | HC | chr1:49465003-49460060 | 20130731 |
| Soybean |
Glyma20g25670.1 |
778 |
88.0 |
93.1 |
|
| LJGI |
gnl|LJGI|TC66074 |
1316 |
100.0 |
100.0 |
similar to UniRef100_A7P3E9 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2179680.1 |
length: 432 aa. |
| IPR002293 |
Amino acid/polyamine transporter I |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0003333 |
amino acid transmembrane transport |
|
|
| Molecular Function |
GO:0015171 |
amino acid transmembrane transporter activity |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPIR |
PIRSF006060 |
Amino |
1.8e-16 |
1-428 |
| HMMPanther |
PTHR11785 |
AMINO |
3.3e-193 |
1-432 |
| no_ID |
|
| HMMPanther |
PTHR11785:SF13 |
AMINO |
3.3e-193 |
1-432 |
| HMMPfam |
PF13520 |
AA_permease_2 |
1.5e-58 |
2-411 |
| Seg |
seg |
seg |
NA |
196-208 |
- Wolf-PSORT
Lj5g3v2179680.1 plas 6, vacu 4, chlo 3, nucl_plas 3, golg_plas 3, cysk_plas 3, E.R._plas 3, mito_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2179680.1 |
|