Miyakogusa Predicted Gene
- Lj5g3v2169580.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S4D5_MEDTR |
243 |
76.8 |
85.4 |
(tr|I3S4D5) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT1G22950.1 |
174 |
52.3 |
71.0 |
| Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:8125291-8127168 REVERSE LENGTH=397 |
| Medicago |
Medtr1g109230.1 |
242 |
76.2 |
85.4 |
| 2OG-Fe(II) oxygenase family oxidoreductase | HC | chr1:49372635-49377988 | 20130731 |
| Soybean |
Glyma10g41460.1 |
219 |
68.2 |
85.8 |
|
| LJGI |
gnl|LJGI|TC80199 |
1003 |
100.0 |
100.0 |
similar to UniRef100_A7P3F6 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2169580.1 |
length: 196 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR24014 |
FAMILY |
7.5e-44 |
30-172 |
| HMMPanther |
PTHR24014:SF0 |
SUBFAMILY |
7.5e-44 |
30-172 |
| Seg |
seg |
seg |
NA |
13-28 |
- Wolf-PSORT
Lj5g3v2169580.1 nucl 7, nucl_plas 5, cyto 3, mito 1, plas 1, extr 1, pero 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2169580.1 |
|