Miyakogusa Predicted Gene

Lj5g3v2169560.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1NFR4_SOYBN 999 78.1 83.8 (tr|I1NFR4) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=2
TAIR_pep AT2G01130.1 808 61.8 73.2 | Symbols: | DEA(D/H)-box RNA helicase family protein | chr2:88847-94635 REVERSE LENGTH=1113
Medicago Medtr1g109170.2 1022 75.1 82.4 | ATP-dependent RNA helicase DHX36-like protein | HC | chr1:49342716-49360401 | 20130731
Soybean Glyma20g25800.1 932 76.7 82.0  
LJGI gnl|LJGI|FS318755 1304 99.3 99.3 similar to UniRef100_A7P3F8 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2169560.2 length: 691 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 1.8e-07 599-676
HMMSmart SM00490 helicase 0.00025 578-687
ProfileScan PS51194 HELICASE_CTER 10.997 550-691
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 3.3e-09 292-446
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 3.5e-30 283-472
ProfileScan PS51192 HELICASE_ATP_BIND_1 22.531 296-463
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.7e-50 295-688
no_ID  
Gene3D G3DSA:3.40.50.300 no description 6.1e-06 286-447
554-645
HMMPanther PTHR18934 ATP-DEPENDENT 2.2e-211 105-677
HMMPanther PTHR18934:SF68 SUBFAMILY 2.2e-211 105-677
Seg seg seg NA 174-188
217-231
422-431
Wolf-PSORT
Lj5g3v2169560.2	chlo 11, nucl 1, plas 1, pero 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2169560.2