Miyakogusa Predicted Gene

Lj5g3v2169430.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IAW6_MEDTR 750 78.9 87.5 (tr|G7IAW6) Protein TRANSPARENT TESTA OS=Medicago truncatula GN=MTR_1g108810 PE=4 SV=1
TAIR_pep AT5G52450.1 502 55.2 69.1 | Symbols: | MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486
Medicago Medtr1g108810.1 750 78.9 87.5 | MATE efflux family protein | HC | chr1:49176036-49172695 | 20130731
Soybean Glyma08g05510.1 557 60.6 76.4  
LJGI gnl|LJGI|TC57830 58.0 89.8 89.8 similar to UniRef100_A7PXG2 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2169430.1 length: 491 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 1.2e-30 47-207
269-430
HMMTigr TIGR00797 matE: 7.5e-91 47-444
no_ID  
HMMPanther PTHR11206 MULTIDRUG 8.1e-231 30-474
HMMPanther PTHR11206:SF21 MATE 8.1e-231 30-474
Seg seg seg NA 52-63
329-341
Wolf-PSORT
Lj5g3v2169430.1	plas 6, E.R. 4, cyto 3, nucl_plas 3, golg_plas 3, cysk_plas 3, mito_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2169430.1