Miyakogusa Predicted Gene

Lj5g3v2167330.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LEN6_SOYBN 719 86.7 91.2 (tr|I1LEN6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep --No_Hits--        
Medicago Medtr1g108650.1 684 78.6 84.8 | TPR repeat protein | HC | chr1:49100693-49107738 | 20130731
Soybean Glyma10g41270.1 719 86.7 91.2  
LJGI gnl|LJGI|FS342418 1296 99.0 99.0 similar to UniRef100_A7P3H5 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2167330.1 length: 420 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.1e-07 86-174
175-255
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 7.778 86-136
223-256
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 61 103-136
223-256
no_ID  
Coil coil coiled-coil NA 150-171
HMMPanther PTHR23083 TETRATRICOPEPTIDE 1.1e-105 46-297
HMMPanther PTHR23083:SF86 SUBFAMILY 1.1e-105 46-297
HMMPfam PF13414 TPR_11 2e-06 86-131
Seg seg seg NA 6-21
286-300
superfamily SSF48452 TPR-like 3.4e-20 72-247
Wolf-PSORT
Lj5g3v2167330.1	cyto_nucl 5.16667, nucl 5, cyto 5, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2167330.1 Not targeted -20.005 -2.133 -2.372 12.96% -15.500