| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | G7IAT6_MEDTR | 439 | 76.6 | 84.8 | (tr|G7IAT6) E3 ubiquitin-protein ligase MARCH2 OS=Medicago truncatula GN=MTR_1g108490 PE=4 SV=1 |
| TAIR_pep | AT2G01275.2 | 256 | 52.5 | 66.4 | | Symbols: | RING/FYVE/PHD zinc finger superfamily protein | chr2:142610-143809 REVERSE LENGTH=259 |
| Medicago | Medtr1g108490.1 | 439 | 76.6 | 84.8 | | RING/FYVE/PHD zinc finger protein | HC | chr1:49037595-49041175 | 20130731 |
| Soybean | Glyma10g41210.1 | 422 | 77.1 | 83.4 | |
| LJGI | gnl|LJGI|TC68817 | 54.0 | 82.8 | 82.8 | similar to UniRef100_A7Q0L7 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (67%) |
| Lj5g3v2166220.1 | length: 269 aa. | |||
| IPR011016 | Zinc finger, RING-CH-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0008270 | zinc ion binding | ||
| HMMPfam | PF12906 | RINGv | 1.4e-12 | 62-107 |
| HMMSmart | SM00744 | The | 1.8e-19 | 61-108 |
| ProfileScan | PS51292 | ZF_RING_CH | 22.018 | 54-114 |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type | |||
| Gene3D | G3DSA:3.30.40.10 | no description | 6.2e-18 | 60-112 |
| IPR022143 | Protein of unknown function DUF3675 | |||
| HMMPfam | PF12428 | DUF3675 | 8.4e-41 | 113-230 |
| no_ID | ||||
| HMMPanther | PTHR23012 | MEMBRANE | 8.1e-40 | 55-242 |
| Seg | seg | seg | NA | 12-24 |
| superfamily | SSF57850 | RING/U-box | 2.2e-14 | 54-114 |
Lj5g3v2166220.1 cyto 7, nucl 4, cyto_plas 4
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v2166220.1 | Not targeted | -17.103 | -0.759 | -12.425 | 9.44% | -3.919 |