Miyakogusa Predicted Gene
- Lj5g3v2152700.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SCE2_LOTJA |
108 |
30.4 |
56.7 |
(tr|I3SCE2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr8g062030.1 |
105 |
33.5 |
54.9 |
| replication factor-A carboxy-terminal domain protein | LC | chr8:25901653-25904109 | 20130731 |
| Soybean |
Glyma10g12770.1 |
54.7 |
27.5 |
47.2 |
|
| LJGI |
gnl|LJGI|TC74725 |
957 |
97.9 |
97.9 |
UniRef100_A9HYM4 Cluster: Thioesterase superfamily protein; n=1; Elusimicrobium minutum Pei191|Rep: Thioesterase superfamily protein - Elusimicrobium minutum Pei191, partial (6%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2152700.1 |
length: 177 aa. |
| IPR012340 |
Nucleic acid-binding, OB-fold |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF50249 |
Nucleic |
2.1e-10 |
85-175 |
| IPR013955 |
Replication factor A, C-terminal |
| HMMPfam |
PF08646 |
Rep_fac-A_C |
6.7e-06 |
104-167 |
- Wolf-PSORT
Lj5g3v2152700.1 chlo 7, cyto 3, nucl 2, mito 1.5, cyto_mito 1.5, cyto_pero 1.5, cyto_E.R. 1.5, cyto_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2152700.1 |
|