Miyakogusa Predicted Gene

Lj5g3v2150470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IAS0_MEDTR 508 65.9 77.2 (tr|G7IAS0) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_1g108270 PE=4 SV=1
TAIR_pep AT1G71060.1 418 61.6 81.0 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:26805651-26807183 REVERSE LENGTH=510
Medicago Medtr1g108270.1 508 65.9 77.2 | PPR containing plant-like protein | HC | chr1:48926827-48924799 | 20130731
Soybean Glyma10g41080.1 473 72.8 84.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2150470.1 length: 391 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0041 164-186
HMMPfam PF13041 PPR_2 1.4e-11 193-236
258-305
330-372
HMMPfam PF13812 PPR_3 0.0094 121-151
HMMTigr TIGR00756 PPR: 8.1e-06 161-188
193-224
261-294
297-328
332-364
ProfileScan PS51375 PPR 11.400 154-188
120-150
189-223
259-293
224-258
294-328
329-363
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.6e-05 255-320
no_ID  
HMMPanther PTHR24015 FAMILY 7.8e-96 9-372
HMMPanther PTHR24015:SF0 SUBFAMILY 7.8e-96 9-372
Seg seg seg NA 158-169
superfamily SSF48452 TPR-like 0.012 259-358
118-216
Wolf-PSORT
Lj5g3v2150470.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2150470.1