Miyakogusa Predicted Gene
- Lj5g3v2113390.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SCZ8_LOTJA |
486 |
94.0 |
94.4 |
(tr|I3SCZ8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT2G15240.1 |
389 |
77.8 |
86.5 |
| Symbols: | UNC-50 family protein | chr2:6615980-6618862 REVERSE LENGTH=252 |
| Medicago |
Medtr1g107430.1 |
451 |
86.8 |
90.3 |
| UNC-50 family protein | HC | chr1:48728970-48724362 | 20130731 |
| Soybean |
Glyma10g40860.1 |
442 |
86.7 |
90.6 |
|
| LJGI |
gnl|LJGI|TC57169 |
1505 |
100.0 |
100.0 |
similar to UniRef100_Q9SKL4 Cluster: Expressed protein; n=1; Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis thaliana (Mouse-ear cress), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2113390.1 |
length: 252 aa. |
| IPR007881 |
UNC-50 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR12841 |
FAMILY |
5e-170 |
9-252 |
| HMMPfam |
PF05216 |
UNC-50 |
1.5e-88 |
20-249 |
| no_ID |
|
| HMMPanther |
PTHR12841:SF2 |
SUBFAMILY |
5e-170 |
9-252 |
| Seg |
seg |
seg |
NA |
101-114 |
- Wolf-PSORT
Lj5g3v2113390.1 plas 6.5, cyto_plas 4, mito 2.5, E.R. 2, cyto_mito 2, chlo 1, vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2113390.1 |
|