Miyakogusa Predicted Gene
- Lj5g3v2113360.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3T8U7_LOTJA |
283 |
88.8 |
88.8 |
(tr|I3T8U7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G34230.1 |
196 |
64.5 |
77.0 |
| Symbols: CAD5, ATCAD5, CAD-5 | cinnamyl alcohol dehydrogenase 5 | chr4:16386898-16388666 REVERSE LENGTH=357 |
| Medicago |
Medtr1g107425.1 |
241 |
73.9 |
81.7 |
| cinnamyl alcohol dehydrogenase-like protein | HC | chr1:48717887-48720740 | 20130731 |
| Soybean |
Glyma10g40870.2 |
253 |
76.3 |
82.2 |
|
| LJGI |
gnl|LJGI|TC63350 |
904 |
100.0 |
100.0 |
similar to UniRef100_A9QWL7 Cluster: Cinnamyl alcohol dehydrogenase; n=1; Acacia auriculiformis x Acacia mangium|Rep: Cinnamyl alcohol dehydrogenase - Acacia auriculiformis x Acacia mangium, complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2113360.2 |
length: 152 aa. |
| IPR002085 |
Alcohol dehydrogenase superfamily, zinc-type |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPanther |
PTHR11695 |
ALCOHOL |
4.5e-57 |
5-152 |
| IPR002328 |
Alcohol dehydrogenase, zinc-type, conserved site |
| Molecular Function |
GO:0008270 |
zinc ion binding |
|
|
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| PatternScan |
PS00059 |
ADH_ZINC |
NA |
68-82 |
| IPR011032 |
GroES-like |
| Gene3D |
G3DSA:3.90.180.10 |
no description |
7.3e-44 |
6-152 |
| superfamily |
SSF50129 |
GroES-like |
1.1e-42 |
5-152 |
| IPR013154 |
Alcohol dehydrogenase GroES-like |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF08240 |
ADH_N |
4.8e-28 |
34-149 |
| no_ID |
|
| HMMPanther |
PTHR11695:SF261ALCOHOL |
DEHYDROGENASE |
4.5e-57 |
5-152 |
| Seg |
seg |
seg |
NA |
66-82 |
- Wolf-PSORT
Lj5g3v2113360.2 chlo 8, cyto 2, extr 2, mito 1, cysk 1, cyto_nucl 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2113360.2 |
|