Miyakogusa Predicted Gene

Lj5g3v2112050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LEH2_SOYBN 985 77.7 85.9 (tr|I1LEH2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G08820.1 363 35.5 54.7 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr3:2677122-2679179 REVERSE LENGTH=685
Medicago Medtr2g094430.1 369 37.2 55.5 | pentatricopeptide (PPR) repeat protein | HC | chr2:40268645-40272453 | 20130731
Soybean Glyma10g40610.1 981 78.3 86.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2112050.1 length: 629 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0013 195-223
382-406
HMMPfam PF13041 PPR_2 4.4e-08 88-135
302-350
407-454
HMMTigr TIGR00756 PPR: 1.9e-06 93-124
195-226
306-334
382-410
410-444
ProfileScan PS51375 PPR 5.897 89-123
124-158
192-226
159-190
302-336
408-442
377-407
338-372
443-473
477-507
543-577
509-539
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00049 490-562
no_ID  
HMMPanther PTHR24015 FAMILY 9e-184 47-619
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 9e-184 47-619
Wolf-PSORT
Lj5g3v2112050.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2112050.1