Miyakogusa Predicted Gene

Lj5g3v2111950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q8LJR8_SOYBN 246 56.3 63.6 (tr|Q8LJR8) RING-H2 finger protein OS=Glycine max PE=2 SV=1
TAIR_pep AT1G49850.1 117 42.8 57.2 | Symbols: | RING/U-box superfamily protein | chr1:18455326-18456444 REVERSE LENGTH=250
Medicago Medtr1g106815.1 218 51.0 58.5 | C3HC4-type RING zinc finger protein | HC | chr1:48341302-48344168 | 20130731
Soybean Glyma10g40540.1 246 56.3 63.6  
LJGI gnl|LJGI|TC70287 720 100.0 100.0 similar to UniRef100_Q8LJR8 Cluster: RING-H2 finger protein; n=1; Glycine max|Rep: RING-H2 finger protein - Glycine max (Soybean), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2111950.1 length: 253 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 4.7e-14 196-239
HMMSmart SM00184 Ring 3e-06 197-237
ProfileScan PS50089 ZF_RING_2 12.770 197-238
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 8.4e-14 195-239
no_ID  
HMMPanther PTHR14155 RING 9.5e-39 84-241
HMMPanther PTHR14155:SF34 ZINC 9.5e-39 84-241
Seg seg seg NA 32-60
102-113
superfamily SSF57850 RING/U-box 1.8e-16 196-244
Wolf-PSORT
Lj5g3v2111950.1	nucl 7, mito 5, cyto 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2111950.1