Miyakogusa Predicted Gene

Lj5g3v2110860.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LEJ4_SOYBN 512 64.3 80.8 (tr|K7LEJ4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G12775.1 306 36.0 61.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:4353906-4355840 FORWARD LENGTH=644
Medicago Medtr0308s0020.1 512 65.1 81.9 | pentatricopeptide (PPR) repeat protein | LC | scaffold0308:7816-9441 | 20130731
Soybean Glyma09g30530.1 499 63.2 79.4  
LJGI gnl|LJGI|FS333759 511 85.4 85.4 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14 scaffold_54, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_54, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2110860.2 length: 399 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 7.3e-12 136-167
173-203
347-377
HMMPfam PF13041 PPR_2 3.1e-19 76-118
210-258
280-329
HMMTigr TIGR00756 PPR: 2.6e-06 74-107
108-141
143-176
179-212
213-247
248-282
283-317
318-352
353-377
ProfileScan PS51375 PPR 9.690 36-70
71-105
106-140
141-175
176-210
211-245
246-280
281-315
316-350
351-381
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00021 240-276
no_ID  
HMMPanther PTHR24015 FAMILY 1e-125 9-377
HMMPanther PTHR24015:SF0 SUBFAMILY 1e-125 9-377
Wolf-PSORT
Lj5g3v2110860.2	chlo 5.5, chlo_mito 4.83333, mito 3, cyto_mito 2.33333, cyto 2, plas 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2110860.2