Miyakogusa Predicted Gene
- Lj5g3v2099500.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IEW9_MEDTR |
770 |
73.5 |
85.4 |
(tr|G7IEW9) Endo-1,4-beta-xylanase A OS=Medicago truncatula GN=MTR_1g106910 PE=4 SV=1 |
| TAIR_pep |
AT4G33840.1 |
517 |
53.5 |
69.7 |
| Symbols: | Glycosyl hydrolase family 10 protein | chr4:16223694-16226095 REVERSE LENGTH=576 |
| Medicago |
Medtr1g106910.1 |
770 |
73.5 |
85.4 |
| glycosyl hydrolase family 10 protein | HC | chr1:48064638-48061499 | 20130731 |
| Soybean |
Glyma20g27040.1 |
759 |
72.1 |
84.8 |
|
| LJGI |
gnl|LJGI|TC58091 |
2936 |
99.9 |
99.9 |
weakly similar to UniRef100_UPI000034F169 Cluster: glycosyl hydrolase family 10 protein; n=1; Arabidopsis thaliana|Rep: glycosyl hydrolase family 10 protein - Arabidopsis thaliana, partial (47%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2099500.1 |
length: 495 aa. |
| IPR001000 |
Glycoside hydrolase, family 10 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF00331 |
Glyco_hydro_10 |
1.7e-39 |
238-474 |
| HMMSmart |
SM00633 |
Glycosyl |
5.7e-06 |
276-495 |
| IPR003305 |
Carbohydrate-binding, CenC-like |
| Molecular Function |
GO:0016798 |
hydrolase activity, acting on glycosyl bonds |
|
|
| HMMPfam |
PF02018 |
CBM_4_9 |
8e-10 |
61-168 |
| IPR008979 |
Galactose-binding domain-like |
| Gene3D |
G3DSA:2.60.120.260 |
no description |
1.6e-14 |
59-198 |
| superfamily |
SSF49785 |
Galactose-binding |
1e-16 |
58-200 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
3.3e-61 |
237-495 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
3.7e-70 |
227-495 |
| no_ID |
|
| HMMPanther |
PTHR31490 |
FAMILY |
1.5e-168 |
25-495 |
- Wolf-PSORT
Lj5g3v2099500.1 nucl 4.5, cyto_nucl 4.5, cyto 3.5, mito 2, plas 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2099500.1 |
|