Miyakogusa Predicted Gene

Lj5g3v2065200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T224_MEDTR 468 55.2 65.6 (tr|I3T224) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT1G23780.1 192 33.5 48.5 | Symbols: | F-box family protein | chr1:8407053-8408480 REVERSE LENGTH=475
Medicago Medtr1g106020.1 468 55.2 65.6 | F-box SKIP22-like protein | HC | chr1:47945673-47943707 | 20130731
Soybean Glyma10g40160.1 428 53.9 63.7  
LJGI gnl|LJGI|TC62229 1370 100.0 100.0 weakly similar to UniRef100_Q9ZUB8 Cluster: F-box protein At1g23780; n=1; Arabidopsis thaliana|Rep: F-box protein At1g23780 - Arabidopsis thaliana (Mouse-ear cress), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2065200.1 length: 465 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00256 A 0.00095 326-366
ProfileScan PS50181 FBOX 9.365 320-366
superfamily SSF81383 F-box 6.4e-08 313-424
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 9.5e-06 323-376
HMMPanther PTHR22844 F-BOX 6.7e-28 1-370
HMMPanther PTHR22844:SF90 PREDICTED 6.7e-28 1-370
Seg seg seg NA 32-47
364-378
411-424
Wolf-PSORT
Lj5g3v2065200.1	chlo 5, nucl 4.5, chlo_mito 4.5, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2065200.1