Miyakogusa Predicted Gene

Lj5g3v2063170.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T532_LOTJA 307 88.6 88.6 (tr|I3T532) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G50020.1 112 52.2 66.4 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:18520144-18521600 REVERSE LENGTH=209

Medicago Medtr1g105970.1 206 63.6 71.6 | tubulin alpha-6 chain, putative | HC | chr1:47891638-47894761 | 20130731

Soybean Glyma20g27290.1 226 67.4 73.0

LJGI gnl|LJGI|FS337822 1033 99.8 99.8 similar to UniRef100_A7QH43 Cluster: Chromosome chr3 scaffold_95, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_95, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v2063170.2 length: 175 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 54-62
147-157

Wolf-PSORT

Lj5g3v2063170.2 chlo 9, golg 2, nucl 1, mito 1, plas 1, nucl_plas 1, mito_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v2063170.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T532_LOTJA	307	88.6	88.6	(tr\|I3T532) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G50020.1	112	52.2	66.4	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:18520144-18521600 REVERSE LENGTH=209
Medicago	Medtr1g105970.1	206	63.6	71.6	\| tubulin alpha-6 chain, putative \| HC \| chr1:47891638-47894761 \| 20130731
Soybean	Glyma20g27290.1	226	67.4	73.0
LJGI	gnl\|LJGI\|FS337822	1033	99.8	99.8	similar to UniRef100_A7QH43 Cluster: Chromosome chr3 scaffold_95, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr3 scaffold_95, whole genome shotgun sequence - Vitis vinifera (Grape), partial (61%)

no_ID
Lj5g3v2063170.2				length: 175 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	54-62 147-157