Miyakogusa Predicted Gene

Lj5g3v2058540.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LLB1_SOYBN 781 74.6 82.5 (tr|K7LLB1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G19320.1 620 61.6 76.6 | Symbols: RANGAP2 | RAN GTPase activating protein 2 | chr5:6505310-6506947 REVERSE LENGTH=545
Medicago Medtr1g105040.1 746 72.5 79.9 | RAN GTPase activating protein | HC | chr1:47338466-47340067 | 20130731
Soybean Glyma10g39620.1 781 74.6 82.5  
LJGI gnl|LJGI|TC67351 1185 98.7 98.7 similar to UniRef100_A7NWI9 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2058540.1 length: 563 aa.
IPR003590 Leucine-rich repeat, ribonuclease inhibitor subtype
method AccNumber shortName E-value location
HMMSmart SM00368 Leucine 18 242-269
270-297
298-325
326-353
354-381
382-409
411-438
439-466
467-494
495-522
IPR025265 WPP domain
HMMPfam PF13943 WPP 8.9e-41 11-108
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1.3e-73 160-552
HMMPanther PTHR24106 FAMILY 4.3e-38 232-530
HMMPfam PF13516 LRR_6 0.017 245-263
300-320
354-377
469-489
Seg seg seg NA 48-62
428-437
528-555
superfamily SSF52047 RNI-like 2e-65 164-559
Wolf-PSORT
Lj5g3v2058540.1	chlo 8, plas 2.5, nucl_plas 2.5, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2058540.1