Miyakogusa Predicted Gene

Lj5g3v2057410.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SCJ5_LOTJA 288 91.0 91.0 (tr|I3SCJ5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT3G05980.1 150 45.3 59.0 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr3:1795514-1796251 FORWARD LENGTH=245

Medicago Medtr1g104840.1 270 62.9 71.4 | hypothetical protein | HC | chr1:47256903-47257899 | 20130731

Soybean Glyma20g28180.1 283 64.7 73.5

LJGI gnl|LJGI|TC65537 1481 99.1 99.1 similar to UniRef100_A1KVJ3 Cluster: Opa1800 outer membrane protein; n=1; Neisseria meningitidis FAM18|Rep: Opa1800 outer membrane protein - Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 /FAM18), partial (9%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v2057410.1 length: 306 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 19-30
141-154
196-214
269-280

Wolf-PSORT

Lj5g3v2057410.1 chlo 6, nucl 6, mito 1, plas 1, mito_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v2057410.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SCJ5_LOTJA	288	91.0	91.0	(tr\|I3SCJ5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT3G05980.1	150	45.3	59.0	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). \| chr3:1795514-1796251 FORWARD LENGTH=245
Medicago	Medtr1g104840.1	270	62.9	71.4	\| hypothetical protein \| HC \| chr1:47256903-47257899 \| 20130731
Soybean	Glyma20g28180.1	283	64.7	73.5
LJGI	gnl\|LJGI\|TC65537	1481	99.1	99.1	similar to UniRef100_A1KVJ3 Cluster: Opa1800 outer membrane protein; n=1; Neisseria meningitidis FAM18\|Rep: Opa1800 outer membrane protein - Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 /FAM18), partial (9%)

no_ID
Lj5g3v2057410.1				length: 306 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	19-30 141-154 196-214 269-280