Miyakogusa Predicted Gene

Lj5g3v2046060.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T3H2_LOTJA 568 100.0 100.0 (tr|I3T3H2) Imidazoleglycerol-phosphate dehydratase OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT4G14910.1 377 89.4 95.7 | Symbols: HISN5B | HISTIDINE BIOSYNTHESIS 5B | chr4:8528451-8530105 REVERSE LENGTH=272

Medicago Medtr1g103820.1 427 79.0 84.3 | imidazoleglycerol-phosphate dehydratase | HC | chr1:46985926-46982177 | 20130731

Soybean Glyma20g28420.2 474 85.3 90.6

LJGI gnl|LJGI|TC60833 1633 100.0 100.0 homologue to UniRef100_Q43072 Cluster: Imidazoleglycerol-phosphate dehydratase; n=1; Pisum sativum|Rep: Imidazoleglycerol-phosphate dehydratase - Pisum sativum (Garden pea), partial (70%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v2046060.1 length: 278 aa.

IPR000807 Imidazoleglycerol-phosphate dehydratase

method AccNumber shortName E-value location

Biological Process GO:0000105 histidine biosynthetic process

Molecular Function GO:0004424 imidazoleglycerol-phosphate dehydratase activity

HAMAP MF_00076 HisB 41.951 82-275

HMMPanther PTHR23133:SF2 IMIDAZOLEGLYCEROL-PHOSPHATE 7.1e-144 51-278

HMMPfam PF00475 IGPD 6.4e-64 111-255

IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site

Biological Process GO:0000105 histidine biosynthetic process

Molecular Function GO:0004424 imidazoleglycerol-phosphate dehydratase activity

PatternScan PS00954 IGP_DEHYDRATASE_1 NA 141-154

PatternScan PS00955 IGP_DEHYDRATASE_2 NA 236-248

IPR020568 Ribosomal protein S5 domain 2-type fold

superfamily SSF54211 Ribosomal 3.6e-36 81-166
167-260

no_ID

Gene3D G3DSA:3.30.230.40 no description 4.5e-34 82-169
170-275

HMMPanther PTHR23133 IMIDAZOLEGLYCEROL-PHOSPHATE 7.1e-144 51-278

Wolf-PSORT

Lj5g3v2046060.1 chlo 12, mito 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v2046060.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T3H2_LOTJA	568	100.0	100.0	(tr\|I3T3H2) Imidazoleglycerol-phosphate dehydratase OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT4G14910.1	377	89.4	95.7	\| Symbols: HISN5B \| HISTIDINE BIOSYNTHESIS 5B \| chr4:8528451-8530105 REVERSE LENGTH=272
Medicago	Medtr1g103820.1	427	79.0	84.3	\| imidazoleglycerol-phosphate dehydratase \| HC \| chr1:46985926-46982177 \| 20130731
Soybean	Glyma20g28420.2	474	85.3	90.6
LJGI	gnl\|LJGI\|TC60833	1633	100.0	100.0	homologue to UniRef100_Q43072 Cluster: Imidazoleglycerol-phosphate dehydratase; n=1; Pisum sativum\|Rep: Imidazoleglycerol-phosphate dehydratase - Pisum sativum (Garden pea), partial (70%)

IPR000807	Imidazoleglycerol-phosphate dehydratase
Lj5g3v2046060.1				length: 278 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0000105	histidine biosynthetic process
Molecular Function	GO:0004424	imidazoleglycerol-phosphate dehydratase activity
HAMAP	MF_00076	HisB	41.951	82-275
HMMPanther	PTHR23133:SF2	IMIDAZOLEGLYCEROL-PHOSPHATE	7.1e-144	51-278
HMMPfam	PF00475	IGPD	6.4e-64	111-255
IPR020565	Imidazoleglycerol-phosphate dehydratase, conserved site
Biological Process	GO:0000105	histidine biosynthetic process
Molecular Function	GO:0004424	imidazoleglycerol-phosphate dehydratase activity
PatternScan	PS00954	IGP_DEHYDRATASE_1	NA	141-154
PatternScan	PS00955	IGP_DEHYDRATASE_2	NA	236-248
IPR020568	Ribosomal protein S5 domain 2-type fold
superfamily	SSF54211	Ribosomal	3.6e-36	81-166 167-260
no_ID
Gene3D	G3DSA:3.30.230.40	no description	4.5e-34	82-169 170-275
HMMPanther	PTHR23133	IMIDAZOLEGLYCEROL-PHOSPHATE	7.1e-144	51-278