Miyakogusa Predicted Gene
- Lj5g3v2045520.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6T8H3_SOYBN |
231 |
80.7 |
88.1 |
(tr|C6T8H3) Putative uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT3G22800.1 |
192 |
64.9 |
81.3 |
| Symbols: | Leucine-rich repeat (LRR) family protein | chr3:8063063-8064475 REVERSE LENGTH=470 |
| Medicago |
Medtr1g103090.1 |
188 |
63.8 |
73.2 |
| LRR/extensin 2 | HC | chr1:46642281-46643496 | 20130731 |
| Soybean |
Glyma20g28790.1 |
231 |
80.7 |
87.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2045520.1 |
length: 150 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
1.2e-19 |
4-94 |
| HMMPanther |
PTHR24420 |
FAMILY |
3.3e-61 |
4-150 |
| HMMPanther |
PTHR24420:SF487SUBFAMILY |
NOT |
3.3e-61 |
4-150 |
| ProfileScan |
PS51257 |
PROKAR_LIPOPROTEIN |
5.000 |
1-18 |
| Seg |
seg |
seg |
NA |
141-150 |
| superfamily |
SSF52058 |
L |
1.3e-15 |
5-89 |
- Wolf-PSORT
Lj5g3v2045520.1 extr 8, chlo 3, nucl 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2045520.1 |
|