Miyakogusa Predicted Gene

Lj5g3v2045300.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N3K0_SOYBN 2896 84.2 90.6 (tr|K7N3K0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G18525.1 1781 54.4 70.3 | Symbols: | protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases | chr5:6146932-6153658 REVERSE LENGTH=1639
Medicago Medtr1g102710.1 2806 82.9 88.8 | Serine/Threonine kinase | HC | chr1:46423862-46415204 | 20130731
Soybean Glyma10g38870.1 1507 81.8 89.0  
LJGI gnl|LJGI|GO012237 1312 99.4 99.4 similar to UniRef100_A7NVW8 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2045300.2 length: 1656 aa.
IPR000409 BEACH domain
method AccNumber shortName E-value location
Gene3D G3DSA:1.10.1540.10 no description 4.2e-59 341-558
HMMPfam PF02138 Beach 5.5e-64 345-576
HMMSmart SM01026 Beige/BEACH 6.3e-94 344-576
ProfileScan PS50197 BEACH 19.874 332-601
superfamily SSF81837 BEACH 2.6e-75 317-576
IPR000719 Protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF00069 Pkinase 1.5e-08 203-283
IPR001680 WD40 repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 2.7e-06 1341-1376
1522-1558
HMMSmart SM00320 WD40 16 1293-1336
1339-1376
1417-1458
1461-1517
1520-1558
1621-1656
ProfileScan PS50082 WD_REPEATS_2 10.843 1527-1560
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 2.1e-11 205-285
714-819
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 4.5e-37 1284-1654
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 10.891 1300-1385
1501-1567
superfamily SSF50978 WD40 3.1e-35 1290-1656
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 1545-1559
no_ID  
Gene3D G3DSA:1.10.510.10 no description 6.1e-08 203-283
716-793
HMMPanther PTHR13743 BEIGE/BEACH-RELATED 1.8e-30 346-555
Seg seg seg NA 253-267
1627-1637
Wolf-PSORT
Lj5g3v2045300.2	cyto 6, nucl 4, cyto_E.R. 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2045300.2