Miyakogusa Predicted Gene

Lj5g3v2045000.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S5R5_LOTJA 330 78.6 78.6 (tr|I3S5R5) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G19910.1 236 84.7 88.5 | Symbols: MED31 | SOH1 family protein | chr5:6731484-6732821 REVERSE LENGTH=196
Medicago Medtr1g102540.1 293 69.9 73.8 | mediator of RNA polymerase II transcription subunit 31 | HC | chr1:46323049-46327447 | 20130731
Soybean Glyma10g38750.2 306 72.3 76.2  
LJGI gnl|LJGI|TC57241 1237 100.0 100.0 homologue to UniRef100_Q8VYB1 Cluster: Mediator of RNA polymerase II transcription subunit 31; n=1; Arabidopsis thaliana|Rep: Mediator of RNA polymerase II transcription subunit 31 - Arabidopsis thaliana (Mouse-ear cress), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2045000.1 length: 206 aa.
IPR008831 Mediator complex, subunit Med31
method AccNumber shortName E-value location
Molecular Function GO:0001104 RNA polymerase II transcription cofactor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Cellular Component GO:0016592 mediator complex    
HMMPanther PTHR13186 MEDIATOR 2.5e-62 7-181
HMMPfam PF05669 Med31 1.9e-36 29-128
no_ID  
HMMPanther PTHR13186:SF0 SUBFAMILY 2.5e-62 7-181
Seg seg seg NA 134-176
Wolf-PSORT
Lj5g3v2045000.1	nucl 8, mito 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2045000.1