Miyakogusa Predicted Gene

Lj5g3v2030840.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7ID49_MEDTR 265 57.9 67.3 (tr|G7ID49) Transcription factor bHLH36 OS=Medicago truncatula GN=MTR_1g102370 PE=4 SV=1
TAIR_pep AT5G51780.1 111 45.1 60.8 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr5:21034879-21036446 FORWARD LENGTH=174
Medicago Medtr1g102370.1 270 58.9 67.7 | transcription factor | HC | chr1:46230813-46229149 | 20130731
Soybean Glyma10g38630.1 258 56.5 65.8  
LJGI gnl|LJGI|TC61520 977 100.0 100.0 weakly similar to UniRef100_A7QGX2 Cluster: Chromosome chr16 scaffold_94, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_94, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2030840.1 length: 258 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 6.1e-08 74-148
HMMPfam PF00010 HLH 7.1e-08 74-126
ProfileScan PS50888 BHLH 12.646 73-125
superfamily SSF47459 HLH, 3.4e-12 71-158
no_ID  
Coil coil coiled-coil NA 115-150
Seg seg seg NA 183-193
Wolf-PSORT
Lj5g3v2030840.1	nucl 9.5, cyto_nucl 5.5, mito 2, chlo 1, cyto_mito 1, golg_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2030840.1