Miyakogusa Predicted Gene

Lj5g3v2029590.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7N3L7_SOYBN 399 78.3 89.4 (tr|K7N3L7) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT5G51840.1 286 61.1 75.4 | Symbols: | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:21072143-21074131 FORWARD LENGTH=245

Medicago Medtr1g101945.1 374 76.5 84.9 | ACI13 | HC | chr1:46028094-46024290 | 20130731

Soybean Glyma20g29280.1 399 78.3 89.4

LJGI gnl|LJGI|TC74476 1493 100.0 100.0 similar to UniRef100_A7QZD8 Cluster: Chromosome chr16 scaffold_271, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_271, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v2029590.2 length: 250 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 41-62
73-94
108-129

Wolf-PSORT

Lj5g3v2029590.2 nucl 10, mito 2, plas 1, golg 1, chlo_mito 1, cyto_mito 1, golg_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v2029590.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7N3L7_SOYBN	399	78.3	89.4	(tr\|K7N3L7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT5G51840.1	286	61.1	75.4	\| Symbols: \| unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). \| chr5:21072143-21074131 FORWARD LENGTH=245
Medicago	Medtr1g101945.1	374	76.5	84.9	\| ACI13 \| HC \| chr1:46028094-46024290 \| 20130731
Soybean	Glyma20g29280.1	399	78.3	89.4
LJGI	gnl\|LJGI\|TC74476	1493	100.0	100.0	similar to UniRef100_A7QZD8 Cluster: Chromosome chr16 scaffold_271, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr16 scaffold_271, whole genome shotgun sequence - Vitis vinifera (Grape), partial (78%)

no_ID
Lj5g3v2029590.2				length: 250 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	41-62 73-94 108-129