Miyakogusa Predicted Gene

Lj5g3v2028360.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LDV5_SOYBN 1335 87.1 92.5 (tr|I1LDV5) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G14610.1 1120 71.1 82.3 | Symbols: TWN2, VALRS | valyl-tRNA synthetase / valine--tRNA ligase (VALRS) | chr1:5008502-5014486 REVERSE LENGTH=1108
Medicago Medtr1g101620.2 1301 84.9 90.1 | valyl-tRNA synthetase/valine-tRNA ligase | HC | chr1:45900200-45890846 | 20130731
Soybean Glyma10g38450.2 1335 87.1 92.5  
LJGI gnl|LJGI|AV778016 1104 100.0 100.0 similar to UniRef100_P93736 Cluster: Valyl-tRNA synthetase; n=2; Arabidopsis thaliana|Rep: Valyl-tRNA synthetase - Arabidopsis thaliana (Mouse-ear cress), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2028360.2 length: 728 aa.
IPR002300 Aminoacyl-tRNA synthetase, class Ia
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF00133 tRNA-synt_1 1.3e-124 26-452
IPR002303 Valine-tRNA ligase
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004832 valine-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006438 valyl-tRNA aminoacylation    
FPrintScan PR00986 TRNASYNTHVAL 1.2e-30 61-78
178-191
296-317
327-345
HMMPanther PTHR11946:SF5 VALYL-TRNA 0 1-728
HMMTigr TIGR00422 valS: 2.6e-205 28-720
IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing domain
Molecular Function GO:0002161 aminoacyl-tRNA editing activity    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
Gene3D G3DSA:3.90.740.10 no description 1.3e-42 28-168
superfamily SSF50677 ValRS/IleRS/LeuRS 2.6e-55 21-174
IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
superfamily SSF47323 Anticodon-binding 8.7e-49 463-726
IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0004812 aminoacyl-tRNA ligase activity    
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006418 tRNA aminoacylation for protein translation    
HMMPfam PF08264 Anticodon_1 4.5e-37 497-640
IPR014729 Rossmann-like alpha/beta/alpha sandwich fold
Gene3D G3DSA:3.40.50.620 no description 1.5e-64 429-450
no_ID  
Coil coil coiled-coil NA 617-638
708-729
Gene3D G3DSA:1.10.730.10 no description 2.6e-53 452-641
HMMPanther PTHR11946 ISOLEUCYL, 0 1-728
Seg seg seg NA 272-282
706-718
superfamily SSF52374 Nucleotidylyl 4.6e-65 174-462
Wolf-PSORT
Lj5g3v2028360.2	cyto 9, nucl 2, chlo 1, mito 1, vacu 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2028360.2