| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7N3M9_SOYBN | 361 | 64.5 | 68.8 | (tr|K7N3M9) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G25500.2 | 194 | 43.5 | 52.7 | | Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35, RS40, At-RS40 | arginine/serine-rich splicing factor 35 | chr4:13026073-13027243 FORWARD LENGTH=309 |
| Medicago | Medtr1g101520.4 | 327 | 57.9 | 63.5 | | RNA-binding (RRM/RBD/RNP motif) family protein | HC | chr1:45856661-45851996 | 20130731 |
| Soybean | Glyma20g29460.1 | 360 | 64.5 | 68.8 | |
| LJGI | gnl|LJGI|TC58851 | 1102 | 99.8 | 99.8 | similar to UniRef100_Q6R4Q7 Cluster: Splicing factor-like protein; n=1; Vitis riparia|Rep: Splicing factor-like protein - Vitis riparia (Frost grape) (Vitis vulpina), partial (18%) |
| Lj5g3v2027300.1 | length: 338 aa. | |||
| IPR000504 | RNA recognition motif domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 4.3e-14 | 56-118 |
| HMMSmart | SM00360 | RNA | 5.7e-19 | 55-121 |
| ProfileScan | PS50102 | RRM | 16.023 | 54-125 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 1.5e-20 | 2-133 |
| no_ID | ||||
| HMMPanther | PTHR10548 | SPLICING | 1.2e-76 | 1-275 |
| HMMPanther | PTHR10548:SF23 | ARGININE/SERINE-RICH | 1.2e-76 | 1-275 |
| Seg | seg | seg | NA | 2-18 38-55 138-159 183-201 301-312 |
| superfamily | SSF54928 | RNA-binding | 0.00091 | 51-157 1-38 |
Lj5g3v2027300.1 nucl 14
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v2027300.1 |