Miyakogusa Predicted Gene

Lj5g3v2017090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LL44_SOYBN 1004 76.0 85.8 (tr|K7LL44) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G61150.1 719 56.5 72.3 | Symbols: HDG1, HD-GL2-1 | homeodomain GLABROUS 1 | chr3:22630769-22634875 FORWARD LENGTH=808
Medicago Medtr1g101280.1 948 73.6 82.9 | homeobox leucine zipper protein | HC | chr1:45748328-45742814 | 20130731
Soybean Glyma10g38280.1 993 76.6 86.3  
LJGI gnl|LJGI|AV407274 527 99.6 99.6 similar to UniRef100_A7PXZ1 Cluster: Chromosome chr15 scaffold_37, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_37, whole genome shotgun sequence - Vitis vinifera (Grape), partial (11%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v2017090.1 length: 661 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00046 Homeobox 1.1e-18 76-131
HMMSmart SM00389 Homeodomain 8.1e-19 74-137
ProfileScan PS50071 HOMEOBOX_2 17.767 73-133
IPR002913 START domain
HMMPfam PF01852 START 5.2e-52 287-510
HMMSmart SM00234 in 9.1e-33 286-511
ProfileScan PS50848 START 41.119 277-514
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 4.4e-21 62-133
superfamily SSF46689 Homeodomain-like 2.5e-20 59-132
IPR017970 Homeobox, conserved site
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
PatternScan PS00027 HOMEOBOX_1 NA 108-131
no_ID  
Coil coil coiled-coil NA 127-163
HMMPanther PTHR24325 FAMILY 0 41-648
HMMPanther PTHR24325:SF0 SUBFAMILY 0 41-648
Seg seg seg NA 228-249
287-299
superfamily SSF55961 Bet 1.3e-11 277-514
528-649
Wolf-PSORT
Lj5g3v2017090.1	nucl 9, chlo 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v2017090.1