Miyakogusa Predicted Gene
- Lj5g3v2013610.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SN32_LOTJA |
405 |
100.0 |
100.0 |
(tr|I3SN32) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT5G52390.1 |
213 |
56.3 |
71.4 |
| Symbols: | PAR1 protein | chr5:21264281-21265173 REVERSE LENGTH=195 |
| Medicago |
Medtr1g101120.1 |
335 |
81.8 |
88.4 |
| PAR1 protein | HC | chr1:45449916-45451710 | 20130731 |
| Soybean |
Glyma20g29860.1 |
328 |
83.5 |
88.7 |
|
| LJGI |
gnl|LJGI|TC58501 |
1189 |
100.0 |
100.0 |
similar to UniRef100_A7QXF1 Cluster: Chromosome undetermined scaffold_222, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_222, whole genome shotgun sequence - Vitis vinifera (Grape), partial (90%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v2013610.1 |
length: 198 aa. |
| IPR009489 |
PAR1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF06521 |
PAR1 |
5.1e-79 |
28-171 |
- Wolf-PSORT
Lj5g3v2013610.1 extr 10, chlo 1, mito 1, vacu 1, E.R. 1, chlo_mito 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v2013610.1 |
Not targeted |
-25.793 |
0 |
-5.660 |
22.16% |
-20.133
|