Miyakogusa Predicted Gene
- Lj5g3v1999250.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LL19_SOYBN |
1084 |
79.1 |
85.0 |
(tr|K7LL19) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G24020.1 |
622 |
52.1 |
65.2 |
| Symbols: NLP7 | NIN like protein 7 | chr4:12479904-12483822 FORWARD LENGTH=959 |
| Medicago |
Medtr1g100970.2 |
1028 |
75.0 |
81.6 |
| plant regulator RWP-RK family protein | HC | chr1:45345073-45340210 | 20130731 |
| Soybean |
Glyma16g30180.1 |
902 |
67.1 |
77.4 |
|
| LJGI |
gnl|LJGI|BP064926 |
345 |
99.5 |
99.5 |
similar to UniRef100_A7QU44 Cluster: Chromosome chr2 scaffold_176 whole genome shotgun sequence; n=1; Vitis vinifera|Rep:, partial (1%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1999250.1 |
length: 684 aa. |
| IPR000270 |
Phox/Bem1p |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00564 |
PB1 |
1.6e-19 |
589-670 |
| HMMSmart |
SM00666 |
PB1 |
1.4e-25 |
589-671 |
| IPR003035 |
RWP-RK domain |
| HMMPfam |
PF02042 |
RWP-RK |
2.3e-26 |
294-344 |
| ProfileScan |
PS51519 |
RWP_RK |
17.677 |
283-364 |
| no_ID |
|
| Gene3D |
G3DSA:3.10.20.240 |
no description |
4.3e-25 |
589-670 |
| HMMPanther |
PTHR32002 |
FAMILY |
1.2e-167 |
4-684 |
| HMMPanther |
PTHR32002:SF0 |
SUBFAMILY |
1.2e-167 |
4-684 |
| Seg |
seg |
seg |
NA |
227-235 |
| superfamily |
SSF54277 |
CAD |
2e-26 |
576-677 |
- Wolf-PSORT
Lj5g3v1999250.1 nucl 10, cyto 2, plas 1, cysk 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1999250.1 |
|