Miyakogusa Predicted Gene

Lj5g3v1988610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G8A217_MEDTR 372 55.5 65.4 (tr|G8A217) Receptor-like protein kinase OS=Medicago truncatula GN=MTR_128s0010 PE=4 SV=1
TAIR_pep AT2G25470.1 162 33.9 50.0 | Symbols: AtRLP21, RLP21 | receptor like protein 21 | chr2:10838420-10841881 FORWARD LENGTH=935
Medicago Medtr1g101250.1 372 55.5 65.4 | LRR receptor-like kinase | LC | chr1:45512285-45515882 | 20130731
Soybean Glyma10g26160.1 271 53.0 64.6  
LJGI gnl|LJGI|TC69923 303 90.4 90.4 similar to UniRef100_Q1S5Q1 Cluster: Leucine-rich repeat; n=1; Medicago truncatula|Rep: Leucine-rich repeat - Medicago truncatula (Barrel medic), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1988610.1 length: 331 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.65 58-80
ProfileScan PS51450 LRR 7.396 8-30
58-81
34-56
147-169
171-193
195-216
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 24 6-30
56-80
145-169
193-216
no_ID  
FPrintScan PR00019 LEURICHRPT 4.2e-06 172-185
193-206
Gene3D G3DSA:3.80.10.10 no description 8.4e-47 126-236
HMMPanther PTHR24420 FAMILY 1.9e-60 3-264
HMMPanther PTHR24420:SF474SUBFAMILY NOT 1.9e-60 3-264
HMMPfam PF13855 LRR_8 1.1e-09 148-206
Seg seg seg NA 195-207
255-267
311-322
superfamily SSF52058 L 3.4e-45 2-240
Wolf-PSORT
Lj5g3v1988610.1	cyto 6, nucl 4, chlo 1, mito 1, pero 1, cysk 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1988610.1