Miyakogusa Predicted Gene

Lj5g3v1988600.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SIR8_LOTJA 374 86.3 86.3 (tr|I3SIR8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G64700.1 124 40.1 52.9 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:24039931-24040542 REVERSE LENGTH=203

Medicago Medtr1g099630.1 278 75.4 81.7 | DUF4228 domain protein | HC | chr1:45000444-44999628 | 20130731

Soybean Glyma20g30270.1 271 67.3 72.5

LJGI gnl|LJGI|TC65311 1235 99.5 99.5 similar to UniRef100_A7QJ45 Cluster: Chromosome chr2 scaffold_105, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_105, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1988600.1 length: 212 aa.

IPR025322 Protein of unknown function DUF4228

method AccNumber shortName E-value location

HMMPfam PF14009 DUF4228 1.4e-17 1-169

no_ID

Seg seg seg NA 129-140
188-203

Wolf-PSORT

Lj5g3v1988600.1 nucl 7, cysk 6

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1988600.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SIR8_LOTJA	374	86.3	86.3	(tr\|I3SIR8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G64700.1	124	40.1	52.9	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G61920.1); Has 48 Blast hits to 47 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:24039931-24040542 REVERSE LENGTH=203
Medicago	Medtr1g099630.1	278	75.4	81.7	\| DUF4228 domain protein \| HC \| chr1:45000444-44999628 \| 20130731
Soybean	Glyma20g30270.1	271	67.3	72.5
LJGI	gnl\|LJGI\|TC65311	1235	99.5	99.5	similar to UniRef100_A7QJ45 Cluster: Chromosome chr2 scaffold_105, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_105, whole genome shotgun sequence - Vitis vinifera (Grape), partial (51%)

IPR025322	Protein of unknown function DUF4228
Lj5g3v1988600.1				length: 212 aa.
method	AccNumber	shortName	E-value	location
HMMPfam	PF14009	DUF4228	1.4e-17	1-169
no_ID
Seg	seg	seg	NA	129-140 188-203