Miyakogusa Predicted Gene

Lj5g3v1986530.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G8A217_MEDTR 501 41.7 52.7 (tr|G8A217) Receptor-like protein kinase OS=Medicago truncatula GN=MTR_128s0010 PE=4 SV=1
TAIR_pep AT3G23120.1 221 31.1 45.0 | Symbols: AtRLP38, RLP38 | receptor like protein 38 | chr3:8227222-8229576 REVERSE LENGTH=784
Medicago Medtr1g101250.1 501 41.7 52.7 | LRR receptor-like kinase | LC | chr1:45512285-45515882 | 20130731
Soybean Glyma10g26160.1 409 38.0 51.2  
LJGI gnl|LJGI|FS322006 85.7 82.1 82.1 weakly similar to UniRef100_A7P9S7 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1986530.1 length: 683 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.6 49-68
241-262
432-454
504-526
ProfileScan PS51450 LRR 5.055 49-70
71-91
92-113
116-138
162-184
185-204
212-233
240-263
288-310
264-285
312-332
336-358
360-382
408-431
432-454
480-502
504-527
603-625
627-649
651-674
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 35 21-46
47-69
114-136
160-183
210-233
286-310
334-358
430-454
502-526
625-649
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 8.4e-09 602-649
no_ID  
Coil coil coiled-coil NA 459-460
FPrintScan PR00019 LEURICHRPT 1.5e-05 289-302
502-515
Gene3D G3DSA:3.80.10.10 no description 1.5e-33 17-230
240-453
579-669
HMMPanther PTHR24420 FAMILY 1.7e-124 97-680
HMMPfam PF13855 LRR_8 5.3e-09 70-127
139-196
287-346
HMMSmart SM00365 Leucine-rich 33 286-301
310-333
502-528
625-657
Seg seg seg NA 402-414
427-441
459-478
651-663
superfamily SSF52047 RNI-like 1e-51 13-324
326-664
Wolf-PSORT
Lj5g3v1986530.1	nucl 7, cyto 2, chlo 1, mito 1, plas 1, cysk 1, golg 1, chlo_mito 1, golg_plas 1, cyto_pero 1, cysk_plas 1, mito_plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1986530.1