Miyakogusa Predicted Gene

Lj5g3v1961200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7ID28_MEDTR 1176 84.3 88.9 (tr|G7ID28) Multidrug resistance protein ABC transporter family OS=Medicago truncatula GN=MTR_1g099280 PE=3 SV=1
TAIR_pep AT3G59140.1 999 72.6 83.1 | Symbols: ATMRP14, MRP14, ABCC10 | multidrug resistance-associated protein 14 | chr3:21863519-21868701 REVERSE LENGTH=1453
Medicago Medtr1g099280.2 1186 86.4 91.1 | ABC transporter-like family-protein | HC | chr1:44809048-44815945 | 20130731
Soybean Glyma20g30490.1 1162 84.9 90.0  
LJGI gnl|LJGI|TC70172 896 100.0 100.0 homologue to UniRef100_A7QTU6 Cluster: Chromosome undetermined scaffold_171, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_171, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1961200.1 length: 662 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 6e-26 102-367
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 1.5e-18 457-581
ProfileScan PS50893 ABC_TRANSPORTER_2 16.420 418-650
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 6.5e-12 442-634
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 1.1e-47 77-398
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 29.765 105-379
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.3e-53 395-636
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 1.2e-51 104-398
Gene3D G3DSA:3.40.50.300 no description 4.6e-63 417-652
HMMPanther PTHR24223 FAMILY 0 1-659
HMMPanther PTHR24223:SF107SUBFAMILY NOT 0 1-659
Seg seg seg NA 164-179
328-338
Wolf-PSORT
Lj5g3v1961200.1	plas 8, vacu 3, mito 1, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1961200.1