Miyakogusa Predicted Gene

Lj5g3v1953040.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SJH1_LOTJA 340 54.4 66.0 (tr|I3SJH1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G06240.1 110 26.5 45.4 | Symbols: | F-box family protein | chr3:1887336-1888619 FORWARD LENGTH=427
Medicago Medtr3g103020.1 248 44.3 59.6 | galactose oxidase | HC | chr3:47452814-47451137 | 20130731
Soybean Glyma06g13220.1 243 42.8 58.5  
LJGI gnl|LJGI|TC67215 365 81.2 81.2 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_67, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1953040.1 length: 368 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 1.3e-07 7-47
HMMSmart SM00256 A 3e-06 11-50
ProfileScan PS50181 FBOX 8.650 5-55
superfamily SSF81383 F-box 1.5e-12 11-93
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 2.9e-20 111-308
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 2.5e-07 13-47
HMMPanther PTHR32133 FAMILY 3.7e-13 8-164
HMMPanther PTHR32133:SF0 SUBFAMILY 3.7e-13 8-164
Wolf-PSORT
Lj5g3v1953040.1	nucl 6, cyto 5, cysk 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1953040.1