Miyakogusa Predicted Gene

Lj5g3v1950950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LKW9_SOYBN 942 78.1 82.8 (tr|K7LKW9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G43690.1 695 59.6 70.4 | Symbols: | ubiquitin interaction motif-containing protein | chr1:16478519-16482589 FORWARD LENGTH=599
Medicago Medtr1g098940.1 927 76.1 81.6 | ubiquitin interaction motif protein | HC | chr1:44587004-44594599 | 20130731
Soybean Glyma10g37000.1 942 78.1 82.8  
LJGI gnl|LJGI|TC61328 1114 100.0 100.0 similar to UniRef100_A7Q7C6 Cluster: Chromosome chr18 scaffold_59, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_59, whole genome shotgun sequence - Vitis vinifera (Grape), partial (14%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1950950.1 length: 617 aa.
IPR003903 Ubiquitin interacting motif
method AccNumber shortName E-value location
HMMSmart SM00726 Ubiquitin-interacting 0.0026 5-24
ProfileScan PS50330 UIM 10.636 5-24
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 0.00031 427-494
IPR025257 Domain of unknown function DUF4205
HMMPfam PF13898 DUF4205 4.7e-63 120-431
no_ID  
HMMPanther PTHR12473 UNCHARACTERIZED 2.5e-119 106-617
Seg seg seg NA 52-67
493-512
568-581
Wolf-PSORT
Lj5g3v1950950.1	nucl 6, chlo 2, cyto 2, plas 1, vacu 1, E.R. 1, cysk 1, chlo_mito 1, E.R._vacu 1, cyto_pero 1, cysk_plas 1, E.R._plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1950950.1