Miyakogusa Predicted Gene

Lj5g3v1938420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LKV6_SOYBN 435 94.5 96.8 (tr|K7LKV6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G43190.2 383 83.5 91.7 | Symbols: PTB3 | polypyrimidine tract-binding protein 3 | chr1:16275432-16278185 REVERSE LENGTH=432
Medicago Medtr1g098530.2 416 90.4 95.0 | polypyrimidine tract-binding-like protein | HC | chr1:44364881-44358462 | 20130731
Soybean Glyma10g36770.1 435 94.5 96.8  
LJGI gnl|LJGI|TC73473 729 100.0 100.0 homologue to UniRef100_A7Q790 Cluster: Chromosome chr18 scaffold_59, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_59, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1938420.1 length: 241 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMSmart SM00360 RNA 0.099 7-76
101-170
ProfileScan PS50102 RRM 11.401 6-80
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 5.2e-28 2-87
102-198
no_ID  
HMMPanther PTHR11546 HETEROGENEOUS 3.2e-98 4-222
HMMPfam PF13893 RRM_5 2.9e-11 22-78
116-174
Seg seg seg NA 220-228
superfamily SSF54928 RNA-binding 1.3e-17 2-85
93-200
Wolf-PSORT
Lj5g3v1938420.1	nucl 6, pero 5, cyto 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1938420.1