Miyakogusa Predicted Gene

Lj5g3v1914060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LDB4_SOYBN 242 44.0 60.1 (tr|I1LDB4) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G23880.1 126 29.5 49.0 | Symbols: | F-box and associated interaction domains-containing protein | chr3:8622061-8623155 REVERSE LENGTH=364
Medicago Medtr2g046900.1 250 43.2 59.0 | F-box protein interaction domain protein | LC | chr2:20604528-20603365 | 20130731
Soybean Glyma10g36430.1 237 43.3 59.8  
LJGI gnl|LJGI|TC74176 163 87.1 87.1 similar to UniRef100_A7Q9Q9 Cluster: Chromosome chr5 scaffold_67, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_67, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1914060.1 length: 351 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 1.6e-09 10-53
HMMSmart SM00256 A 1.2e-09 14-54
ProfileScan PS50181 FBOX 12.041 8-54
superfamily SSF81383 F-box 2.6e-15 1-55
IPR006527 F-box associated domain, type 1
HMMPfam PF07734 FBA_1 0.00014 213-323
IPR017451 F-box associated interaction domain
HMMTigr TIGR01640 F_box_assoc_1: 2.8e-28 113-322
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 6.7e-10 7-50
HMMPanther PTHR32133 FAMILY 6.3e-23 9-255
HMMPanther PTHR32133:SF0 SUBFAMILY 6.3e-23 9-255
Seg seg seg NA 4-15
Wolf-PSORT
Lj5g3v1914060.1	cyto 8, nucl 2, mito 1, plas 1, extr 1, golg 1, cysk_nucl 1, golg_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1914060.1