Miyakogusa Predicted Gene

Lj5g3v1903700.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N3Z8_SOYBN 561 86.8 95.5 (tr|K7N3Z8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G71720.1 446 71.5 84.5 | Symbols: | Nucleic acid-binding proteins superfamily | chr1:26983744-26985893 FORWARD LENGTH=500
Medicago Medtr1g097610.1 549 86.1 92.6 | 30S ribosomal protein S1 | HC | chr1:44033341-44028473 | 20130731
Soybean Glyma20g31060.1 561 86.8 95.5  
LJGI gnl|LJGI|TC74962 827 99.3 99.3 similar to UniRef100_A7QRK4 Cluster: Chromosome undetermined scaffold_151, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_151, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1903700.2 length: 310 aa.
IPR003029 Ribosomal protein S1, RNA-binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00575 S1 2.2e-10 96-162
173-243
ProfileScan PS50126 S1 13.609 96-164
175-244
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.7e-12 86-165
172-248
superfamily SSF50249 Nucleic 1.3e-09 172-257
82-165
IPR022967 RNA-binding domain, S1
HMMSmart SM00316 Ribosomal 9.2e-10 94-164
173-244
no_ID  
HMMPanther PTHR10287 S1 3.9e-44 52-309
Wolf-PSORT
Lj5g3v1903700.2	cyto 9, chlo 2, extr 1, E.R. 1, cysk 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1903700.2