Miyakogusa Predicted Gene

Lj5g3v1889490.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr5

Full length sequence(34192293 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SA08_LOTJA 293 100.0 100.0 (tr|I3SA08) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G71780.1 202 62.7 81.3 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:26995406-26996638 REVERSE LENGTH=197

Medicago Medtr1g097400.2 226 71.0 82.6 | transmembrane protein, putative | HC | chr1:43943109-43940099 | 20130731

Soybean Glyma16g27590.1 215 67.8 81.6

LJGI gnl|LJGI|TC64792 1017 100.0 100.0 weakly similar to UniRef100_A7QRM6 Cluster: Chromosome undetermined scaffold_151, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_151, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj5g3v1889490.1 length: 170 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 2-19

Wolf-PSORT

Lj5g3v1889490.1 plas 8, E.R. 3, golg 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj5g3v1889490.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SA08_LOTJA	293	100.0	100.0	(tr\|I3SA08) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G71780.1	202	62.7	81.3	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:26995406-26996638 REVERSE LENGTH=197
Medicago	Medtr1g097400.2	226	71.0	82.6	\| transmembrane protein, putative \| HC \| chr1:43943109-43940099 \| 20130731
Soybean	Glyma16g27590.1	215	67.8	81.6
LJGI	gnl\|LJGI\|TC64792	1017	100.0	100.0	weakly similar to UniRef100_A7QRM6 Cluster: Chromosome undetermined scaffold_151, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome undetermined scaffold_151, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)

no_ID
Lj5g3v1889490.1				length: 170 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	2-19