Miyakogusa Predicted Gene
- Lj5g3v1889400.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S4G2_LOTJA |
480 |
89.9 |
89.9 |
(tr|I3S4G2) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G69640.1 |
324 |
59.2 |
75.2 |
| Symbols: SBH1 | sphingoid base hydroxylase 1 | chr1:26193933-26195466 REVERSE LENGTH=260 |
| Medicago |
Medtr1g097310.2 |
443 |
84.0 |
88.3 |
| sphingoid base hydroxylase-like protein | HC | chr1:43897435-43901038 | 20130731 |
| Soybean |
Glyma10g36370.1 |
444 |
82.9 |
87.2 |
|
| LJGI |
gnl|LJGI|TC62051 |
1540 |
100.0 |
100.0 |
similar to UniRef100_A7QRN3 Cluster: Chromosome undetermined scaffold_151, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_151, whole genome shotgun sequence - Vitis vinifera (Grape), partial (95%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1889400.1 |
length: 257 aa. |
| IPR006694 |
Fatty acid hydroxylase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005506 |
iron ion binding |
|
|
| Biological Process |
GO:0006633 |
fatty acid biosynthetic process |
|
|
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF04116 |
FA_hydroxylase |
5.5e-19 |
101-214 |
| no_ID |
|
| HMMPanther |
PTHR11863 |
STEROL |
1.7e-128 |
4-257 |
| HMMPanther |
PTHR11863:SF3 |
SUR2 |
1.7e-128 |
4-257 |
| Seg |
seg |
seg |
NA |
57-80 |
- Wolf-PSORT
Lj5g3v1889400.1 cyto 7.5, cyto_E.R. 5.5, E.R. 2.5, nucl 1, plas 1, extr 1, vacu 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1889400.1 |
|