Miyakogusa Predicted Gene
- Lj5g3v1889390.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LDA8_SOYBN |
828 |
73.9 |
81.7 |
(tr|I1LDA8) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G34190.1 |
415 |
44.1 |
56.8 |
| Symbols: anac017, NAC017 | NAC domain containing protein 17 | chr1:12451729-12453914 FORWARD LENGTH=557 |
| Medicago |
Medtr1g097300.1 |
796 |
70.6 |
79.7 |
| NAC transcription factor-like protein | HC | chr1:43891021-43886555 | 20130731 |
| Soybean |
Glyma10g36360.1 |
828 |
73.9 |
81.7 |
|
| LJGI |
gnl|LJGI|TC75644 |
1945 |
100.0 |
100.0 |
similar to UniRef100_A7QRN5 Cluster: Chromosome undetermined scaffold_151, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_151, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1889390.1 |
length: 559 aa. |
| IPR003441 |
No apical meristem (NAM) protein |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003677 |
DNA binding |
|
|
| Biological Process |
GO:0006355 |
regulation of transcription, DNA-dependent |
|
|
| HMMPfam |
PF02365 |
NAM |
5.9e-51 |
20-146 |
| ProfileScan |
PS51005 |
NAC |
54.327 |
19-169 |
| superfamily |
SSF101941 |
NAC |
2.6e-59 |
3-170 |
| no_ID |
|
| HMMPanther |
PTHR31989 |
FAMILY |
2.2e-110 |
8-538 |
| HMMPanther |
PTHR31989:SF0 |
SUBFAMILY |
2.2e-110 |
8-538 |
| Seg |
seg |
seg |
NA |
198-210 |
- Wolf-PSORT
Lj5g3v1889390.1 nucl 7, E.R. 2, cysk 2, chlo 1, plas 1, vacu 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1889390.1 |
|