Miyakogusa Predicted Gene

Lj5g3v1871880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9S9Q5_RICCO 142 100.0 100.0 (tr|B9S9Q5) 30S ribosomal protein S10, putative OS=Ricinus communis GN=RCOM_0521090 PE=3 SV=1
TAIR_pep AT3G13120.2 139 98.5 100.0 | Symbols: | Ribosomal protein S10p/S20e family protein | chr3:4220310-4221526 REVERSE LENGTH=191
Medicago Medtr3g058430.1 129 90.9 97.0 | 30S ribosomal protein S10 | HC | chr3:23188302-23185134 | 20130731
Soybean Glyma08g43950.1 139 100.0 100.0  
LJGI gnl|LJGI|TC57707 400 100.0 100.0 homologue to UniRef100_A1YMX4 Cluster: 30S ribosomal protein S10-like; n=1; Brassica rapa|Rep: 30S ribosomal protein S10-like - Brassica campestris (Field mustard), partial (59%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1871880.1 length: 66 aa.
IPR001848 Ribosomal protein S10
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
FPrintScan PR00971 RIBOSOMALS10 1e-10 4-19
25-39
HAMAP MF_00508 Ribosomal_S10 10.623 1-66
HMMPanther PTHR11700 30S 2.9e-37 1-66
HMMTigr TIGR01049 rpsJ_bact: 1.3e-29 2-65
IPR027486 Ribosomal protein S10 domain
Gene3D G3DSA:3.30.70.600 no description 7.6e-28 2-66
HMMPfam PF00338 Ribosomal_S10 8.3e-26 2-66
superfamily SSF54999 Ribosomal 4.2e-22 2-66
no_ID  
HMMPanther PTHR11700:SF2 30S 2.9e-37 1-66
Wolf-PSORT
Lj5g3v1871880.1	nucl 8, mito 2, chlo 1, cyto 1, plas 1, E.R. 1, cyto_mito 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1871880.1