| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7N448_SOYBN | 313 | 79.1 | 84.2 | (tr|K7N448) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G10110.1 | 178 | 56.5 | 68.9 | | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr4:6309606-6310809 REVERSE LENGTH=173 |
| Medicago | Medtr1g096170.1 | 280 | 70.5 | 79.0 | | RNA recognition motif, a.k.a. RRM, RBD protein | HC | chr1:43247569-43243736 | 20130731 |
| Soybean | Glyma10g35900.1 | 306 | 85.7 | 91.4 | |
| LJGI | --No_Hits-- |
| Lj5g3v1853140.1 | length: 196 aa. | |||
| IPR000504 | RNA recognition motif domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 1.2e-14 | 9-80 |
| HMMSmart | SM00360 | RNA | 1.5e-16 | 8-82 |
| ProfileScan | PS50102 | RRM | 14.607 | 7-86 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 7e-17 | 2-80 |
| no_ID | ||||
| HMMPanther | PTHR24011 | FAMILY | 8.7e-56 | 1-186 |
| HMMPanther | PTHR24011:SF129SUBFAMILY | NOT | 8.7e-56 | 1-186 |
| Seg | seg | seg | NA | 176-189 |
| superfamily | SSF54928 | RNA-binding | 7.8e-19 | 1-109 |
Lj5g3v1853140.1 nucl 13
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj5g3v1853140.1 |