Miyakogusa Predicted Gene

Lj5g3v1853110.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S188_LOTJA 239 98.3 99.2 (tr|I3S188) Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Lotus japonicus GN=GATC PE=2 SV=1
TAIR_pep AT4G32915.1 120 57.4 84.0 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of translational fidelity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glu-tRNAGln amidotransferase, C subunit (InterPro:IPR003837); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:15885549-15886628 FORWARD LENGTH=155
Medicago Medtr1g095920.1 167 70.1 86.9 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C | HC | chr1:43184708-43187539 | 20130731
Soybean Glyma20g31750.1 185 76.9 86.0  
LJGI gnl|LJGI|TC65398 797 98.3 98.3 similar to UniRef100_A7P4G1 Cluster: Chromosome chr4 scaffold_6, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_6, whole genome shotgun sequence - Vitis vinifera (Grape), partial (62%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1853110.1 length: 139 aa.
IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit
method AccNumber shortName E-value location
Biological Process GO:0006450 regulation of translational fidelity    
HAMAP MF_00122 GatC 17.829 45-137
HMMPfam PF02686 Glu-tRNAGln 1.3e-13 62-132
HMMTigr TIGR00135 gatC: 7.6e-16 50-136
no_ID  
HMMPanther PTHR13373 FROUNT 1.2e-25 8-138
HMMPanther PTHR13373:SF14 SUBFAMILY 1.2e-25 8-138
Seg seg seg NA 2-21
superfamily SSF141000 Glu-tRNAGln 3.2e-17 45-135
Wolf-PSORT
Lj5g3v1853110.1	chlo 8.5, chlo_mito 6.5, mito 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1853110.1