Miyakogusa Predicted Gene

Lj5g3v1853020.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I9M5_MEDTR 1185 74.9 81.4 (tr|G7I9M5) Mitochondrial glutamate carrier OS=Medicago truncatula GN=MTR_1g095780 PE=3 SV=1
TAIR_pep AT2G35800.1 914 56.9 69.1 | Symbols: | mitochondrial substrate carrier family protein | chr2:15044437-15048352 FORWARD LENGTH=823
Medicago Medtr1g095780.1 1185 74.9 81.4 | substrate carrier family protein | HC | chr1:43106725-43114027 | 20130731
Soybean Glyma20g31800.1 1114 71.1 76.8  
LJGI gnl|LJGI|TC68418 1820 100.0 100.0 similar to UniRef100_A7PI87 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1853020.1 length: 790 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMPfam PF13405 EF_hand_4 5.8e-05 354-379
ProfileScan PS50222 EF_HAND_2 5.698 313-329
348-383
450-485
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 2.8e-13 313-366
367-482
IPR018108 Mitochondrial substrate/solute carrier
HMMPfam PF00153 Mito_carr 2.4e-20 514-594
607-687
693-781
ProfileScan PS50920 SOLCAR 18.501 513-593
602-684
693-777
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 361-373
IPR023395 Mitochondrial carrier domain
Gene3D G3DSA:1.50.40.10 no description 1.2e-56 515-777
superfamily SSF103506 Mitochondrial 1.7e-53 510-774
no_ID  
HMMPanther PTHR24089 FAMILY 6.6e-134 487-790
HMMPanther PTHR24089:SF45 SUBFAMILY 6.6e-134 487-790
Seg seg seg NA 168-179
268-286
496-512
518-533
700-712
superfamily SSF47473 EF-hand 4.1e-15 348-482
Wolf-PSORT
Lj5g3v1853020.1	nucl 10, cyto 2, chlo 1, plas 1, cyto_pero 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1853020.1