Miyakogusa Predicted Gene

Lj5g3v1839400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7N458_SOYBN 1853 69.1 77.1 (tr|K7N458) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G52250.1 523 36.5 52.6 | Symbols: | Duplicated homeodomain-like superfamily protein | chr3:19376629-19383100 FORWARD LENGTH=1656
Medicago Medtr1g095570.1 1689 64.7 73.7 | Myb DNA-binding domain protein | HC | chr1:42995245-43004049 | 20130731
Soybean Glyma10g35670.1 1452 60.8 69.1  
LJGI gnl|LJGI|AI967347 589 99.3 99.3 similar to UniRef100_A6ZRQ9 Cluster: Conserved protein; n=1; Saccharomyces cerevisiae YJM789|Rep: Conserved protein - Saccharomyces cerevisiae (strain YJM789) (Baker's yeast), partial (3%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1839400.1 length: 1406 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 1e-07 797-838
1013-1054
HMMSmart SM00717 SANT 4e-09 794-842
1010-1058
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 3.8e-06 797-838
1013-1054
superfamily SSF46689 Homeodomain-like 1.6e-11 779-842
995-1062
IPR017884 SANT domain
ProfileScan PS51293 SANT 14.067 793-844
1009-1060
no_ID  
Coil coil coiled-coil NA 425-453
HMMPanther PTHR13992 NUCLEAR 1.3e-100 652-1189
HMMPanther PTHR13992:SF7 GB 1.3e-100 652-1189
Seg seg seg NA 97-111
202-214
591-604
847-858
921-932
1277-1295
Wolf-PSORT
Lj5g3v1839400.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1839400.1