Miyakogusa Predicted Gene

Lj5g3v1827320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6HGR7_VITVI 1199 65.8 79.3 (tr|F6HGR7) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g02500 PE=4 SV=1
TAIR_pep AT4G13650.1 598 36.1 56.9 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr4:7939611-7942898 REVERSE LENGTH=1064
Medicago Medtr1g111020.2 626 39.3 57.9 | pentatricopeptide (PPR) repeat protein | HC | chr1:50134416-50129873 | 20130731
Soybean Glyma14g00690.1 589 36.1 56.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1827320.1 length: 978 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.51 140-166
242-266
343-363
646-668
747-771
HMMPfam PF13041 PPR_2 2e-11 167-214
268-315
369-414
571-618
672-719
HMMTigr TIGR00756 PPR: 3.2e-08 140-169
169-202
371-405
573-607
674-708
ProfileScan PS51375 PPR 6.873 101-135
167-201
136-166
268-302
237-267
202-236
303-337
369-403
338-368
470-504
439-469
404-438
505-539
571-605
540-570
672-706
641-671
606-640
707-742
809-843
743-777
no_ID  
HMMPanther PTHR24015 FAMILY 8.6e-295 104-978
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 8.6e-295 104-978
HMMPfam PF14432 DYW_deaminase 5.7e-15 858-968
Seg seg seg NA 31-45
50-69
Wolf-PSORT
Lj5g3v1827320.1	nucl 8, chlo 2, cyto 2, plas 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1827320.1