Miyakogusa Predicted Gene
- Lj5g3v1816230.4
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr5
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LD19_SOYBN |
469 |
75.5 |
84.0 |
(tr|I1LD19) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT2G28880.1 |
251 |
46.2 |
65.0 |
| Symbols: emb1997, ADCS | para-aminobenzoate (PABA) synthase family protein | chr2:12398937-12403108 REVERSE LENGTH=919 |
| Medicago |
Medtr1g095360.1 |
395 |
67.5 |
74.8 |
| para-aminobenzoate synthase | HC | chr1:42888171-42898308 | 20130731 |
| Soybean |
Glyma10g35580.1 |
457 |
73.9 |
81.7 |
|
| LJGI |
gnl|LJGI|TC79942 |
1536 |
98.6 |
98.6 |
similar to UniRef100_A7PI60 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (35%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj5g3v1816230.4 |
length: 317 aa. |
| IPR017926 |
Glutamine amidotransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF00117 |
GATase |
1.7e-07 |
82-123 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.880 |
no description |
1.5e-17 |
87-130 |
| HMMPanther |
PTHR11236 |
AMINOBENZOATE/ANTHRANILATE |
1.1e-23 |
12-316 |
| HMMPanther |
PTHR11236:SF7 |
P-AMINOBENZOATE |
1.1e-23 |
12-316 |
| superfamily |
SSF52317 |
Class |
1.1e-10 |
83-127 |
- Wolf-PSORT
Lj5g3v1816230.4 nucl 8, chlo 2, cyto 2, plas 1, extr 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj5g3v1816230.4 |
|