Miyakogusa Predicted Gene

Lj5g3v1812820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LKL9_SOYBN 815 68.8 73.9 (tr|K7LKL9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G30080.1 537 54.0 65.2 | Symbols: ARF16 | auxin response factor 16 | chr4:14703369-14705564 REVERSE LENGTH=670
Medicago Medtr1g094960.1 777 66.5 73.3 | auxin response factor, putative | HC | chr1:42729587-42732600 | 20130731
Soybean Glyma20g32040.1 788 68.1 73.6  
LJGI gnl|LJGI|TC64983 890 99.8 99.8 similar to UniRef100_A7PT37 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1812820.1 length: 613 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 4.3e-22 123-224
HMMSmart SM01019 B3 8.7e-20 123-225
ProfileScan PS50863 B3 13.140 123-225
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 1.8e-33 280-363
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 1.7e-36 118-226
superfamily SSF101936 DNA-binding 3.6e-30 106-224
no_ID  
HMMPanther PTHR31384 FAMILY 2e-176 13-485
Seg seg seg NA 220-231
275-285
416-437
540-556
Wolf-PSORT
Lj5g3v1812820.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1812820.1