Miyakogusa Predicted Gene

Lj5g3v1811810.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr5
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LKL8_SOYBN 451 71.0 74.6 (tr|K7LKL8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G54810.1 145 80.5 87.8 | Symbols: BME3-ZF, BME3, GATA8 | Plant-specific GATA-type zinc finger transcription factor family protein | chr3:20296957-20298236 FORWARD LENGTH=322
Medicago Medtr1g094930.1 360 60.1 67.3 | GATA type zinc finger transcription factor family protein | HC | chr1:42711159-42715182 | 20130731
Soybean Glyma20g32050.1 429 69.3 73.2  
LJGI gnl|LJGI|TC69016 2091 99.9 99.9 similar to UniRef100_A7PI38 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (65%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj5g3v1811810.1 length: 351 aa.
IPR000679 Zinc finger, GATA-type
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00320 GATA 8.2e-15 261-294
HMMSmart SM00401 zinc 1.7e-16 255-305
PatternScan PS00344 GATA_ZN_FINGER_1 NA 261-286
ProfileScan PS50114 GATA_ZN_FINGER_2 11.583 255-291
IPR013088 Zinc finger, NHR/GATA-type
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.30.50.10 no description 8.5e-14 259-292
IPR016679 Transcription factor, GATA, plant
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0045893 positive regulation of transcription, DNA-dependent    
HMMPIR PIRSF016992 GATA 5.7e-74 6-345
no_ID  
HMMPanther PTHR10071 TRANSCRIPTION 1e-42 221-335
HMMPanther PTHR10071:SF113ZINC FINGER 1e-42 221-335
Seg seg seg NA 33-52
133-146
232-238
superfamily SSF57716 Glucocorticoid 2.1e-19 255-320
Wolf-PSORT
Lj5g3v1811810.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj5g3v1811810.1